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August 10, 2003
 
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Lō'ihi Clones Table
Query Name Accession No NT legnth (bp) %ID Hit name Hit description
T7-1-3B02 AY345558 567 90% emb|AJ315452.1|UMA315452 Uncultured marine bacterium partial 16S rRNA gene, isolate LQ-2001
T7-1B02 AY345559 586 94% gb|U70683.1| Unidentified a-proteobacterium OM75 16S ribosomal RNA gene,
T7-1C04 AY345560 590 100% gb|AF494544.1| Ochrobactrum sp. BPC6 16S ribosomal RNA gene, partial sequence
T7-2-1A03 AY345561 723 99% gb|AF439314.1|AF439314 Achromobacter xylosoxidans subsp. xylosoxidans strain A19 16S
T7-2-1C03 AY345562 723 98% gb|AY283260.1| Alcaligenes sp. PCNB-2 16S ribosomal RNA gene, partial sequence
T7-2-1C04 AY345563 753 97% emb|AJ242576.1|OAN242576 Ochrobactrum anthropi partial 16S rRNA gene, strain CLM18
T7-2-1E03 AY345564 736 99% gb|AY162042.1| g-proteobacterium PI_GH2.1.C4 small subunit ribosomal RNA gene,
T7-2B09 AY345565 473 95% gb|AF423220.1| Uncultured soil bacterium clone 1315-2 16S ribosomal RNA gene,
T7-2C01 AY345566 455 94% gb|AF424275.1| Uncultured a-proteobacterium MERTZ_2CM_147 16S ribosomal RNA
T7-M-H08 AY345567 731 94% gb|AF287025.1|AF287025 Uncultured a-proteobacterium EC-B2 16S ribosomal RNA gene,
T7-2D11 AY345568 600 100% emb|AJ000647.1|HSJ000647 Marinobacter sp. PCOB-2 16S ribosomal RNA gene
T7-3B09 AY345569 716 98% gb|AY299092.1| Brevibacterium aureum strain Enb15 16S ribosomal RNA gene, partial
T7-3F01 AY345570 601 100% emb|X97070.1|LC16SRR L.cholodnii 16S rRNA gene
T7-4B12 AY345571 438 97% gb|AF440705.1| Uncultured a-proteobacterium ARCT1-17 16S ribosomal RNA gene,
T7-M-A08 AY345572 694 95% gb|AF469368.1| Uncultured bacterium clone 33-FL54B99 16S ribosomal RNA gene,
T7-M-E08 AY345573 684 97% gb|AF328762.1| Alcanivorax venusti strain ISO4 16S ribosomal RNA gene, partial
T7-2C10 AY345574 574 100% gb|AY157973.1| Fe-oxidizing bacterium FO8 16S ribosomal RNA gene, partial sequence
         
Lō'ihi Cultures Table
 
Query Name Accession No NT legnth (bp) %ID Hit name Hit description
R5B_full AY345357 1200 96% gb|AF326369.1| Bacillus sp. PL-26 16S ribosomal RNA gene, partial sequence
R10CA AY345358 1394 99% emb|AJ000726.1|MAAJ726 Marinobacter aquaeolei 16S rRNA gene
Ph21 AY345359 1418 100% dbj|D16271.1|BAC16SRR06 Bacillus laterosporus 16S rRNA gene
Ph20 AY345360 674 97% emb|Z93445.1|ASZ93445 Acinetobacter radioresistens 16S rRNA gene (strain M 17694T)
Ph2 AY345361 1392 97% emb|AJ244681.2|CCF244681 Corynebacterium cf. aquaticum V4.BO.26 partial 16S rRNA gene, marine
Ph16 AY345362 1402 99% emb|AJ244725.1|PCF244725 Pseudomonas cf. synxantha V4.BP.03 partial 16S rRNA gene
Ph15 AY345363 514 96% emb|AJ227773.1|CSJ227773 Caulobacter sp. DNA for 16S ribosomal RNA, strain FWC35
Ph10 AY345364 848 97% dbj|AB094467.1| Kocuria sp. 2216.35.31 gene for 16S rRNA, partial sequence
Ph1_Loihi AY345365 767 96% emb|AJ244681.2|CCF244681 Corynebacterium cf. aquaticum V4.BO.26 partial 16S rRNA gene,
L9 AY345366 690 99% dbj|AB025599.1| Halomonas sp. MBIC2031 gene for 16S ribosomal RNA, partial sequence
L7 AY345367 681 99% gb|U70695.1| Unidentified g-proteobacterium OM59 16S ribosomal RNA gene,
L5 AY345368 1415 98% gb|AF513448.1| Alteromonadaceae bacterium LA13 16S ribosomal RNA gene, partial
L3 AY345369 612 98% gb|AF057645.1|AF057645 Pseudomonas libaniensis 16S ribosomal RNA gene, complete sequence
L15 AY345370 676 100% emb|AJ557849.1|MAR557849 Marine arctic deep-sea bacterium HG11 partial 16S rRNA gene
L14 AY345371 1417 99% gb|AE017013.1| Bacillus cereus ATCC 14579 section 16 of 18 of the complete genome
JB10 AY345372 1425 99% gb|AF227238.1|AF227238 Pseudoalteromonas sp. A28 16S ribosomal RNA gene, partial sequence
L11 AY345373 695 98% gb|AY136097.1| Sphingomonas sp. KIN182 16S ribosomal RNA gene, partial sequence
JB9 AY345374 1411 99% dbj|AB078014.1| Alteromonas sp. SHY1-1 gene for 16S rRNA, partial sequence
JB8 AY345375 1411 98% gb|AF500207.1| Vibrio sp. CJ11052 16S ribosomal RNA gene, partial sequence
JB7 AY345376 1427 98% emb|AJ550855.1|AEN550855 Allomonas enterica partial 16S rRNA gene, type strain LMG 21754
JB5 AY345377 1453 98% emb|AJ550855.1|AEN550855 Allomonas enterica partial 16S rRNA gene, type strain LMG 21754
JB4 AY345378 1424 99% gb|AF410779.1|AF410779 Vibrio sp. NLEP97-1599 16S ribosomal RNA gene, partial sequence
JB3 AY345379 1403 98% emb|AJ306888.1|HAQ306888 Halomonas aquamarina partial 16S rRNA gene, strain DSM 30161
JB2 AY345380 1462 98% gb|AE004844.1| Pseudomonas aeruginosa PAO1, section 405 of 529 of the complete
JB18 AY345381 1403 99% gb|AY162139.1| Pseudomonas aeruginosa strain BHP7-6 16S ribosomal RNA gene, partial
JB17 AY345382 1386 98% emb|Z76666.1|PPZ76666 P.pseudoalcaligenes (strain LMG 1225T) 16S rRNA gene
JB16 AY345383 1413 99% gb|AF387346.1|AF387346 Shewanella sp. CL256/73 16S ribosomal RNA gene, partial sequence
JB15 AY345384 1429 98% emb|X74714.1|VN16SRRNA V.natriegens (ATCC 14048T) gene for 16S ribosomal RNA
JB14 AY345385 1412 99% gb|U26414.1|PSU26414 Pseudomonas stutzeri strain DNSP21 16S rRNA gene
JB13 AY345386 1445 98% emb|AJ550855.1|AEN550855 Allomonas enterica partial 16S rRNA gene, type strain LMG 21754
JB12 AY345387 1406 99% gb|AY082664.1| Marine bacterium July88 small subunit ribosomal RNA gene, partial
JB11 AY345388 1408 91% emb|X92128.1|BSPRR20N1 Bacterial sp. 16S rRNA gene (Lake Nakuru isolate 20N1)
L12 AY345389 1398 94% gb|U70683.1| Unidentified a-proteobacterium OM75 16S ribosomal RNA gene,
 
 
             
 
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